PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009803314.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 303aa    MW: 32982.6 Da    PI: 8.9499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009803314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.6e-2093142255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa+ ++aa+++++g
  XP_009803314.1  93 HYRGVRKRP-WGRYAAEIRDpFK----KTRVWLGTFDTPEEAARTYDAAAREFHG 142
                     69*******.**********662....5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.62E-3293149No hitNo description
Gene3DG3DSA:3.30.730.106.7E-3093149IPR001471AP2/ERF domain
SMARTSM003804.7E-3593156IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2193150IPR016177DNA-binding domain
PfamPF008473.1E-1393142IPR001471AP2/ERF domain
PROSITE profilePS5103222.99893150IPR001471AP2/ERF domain
PRINTSPR003672.1E-1094105IPR001471AP2/ERF domain
PRINTSPR003672.1E-10116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MMTDNGQNNR RKRVRNNRQQ NTNAAFFIAF SFQEGGGYLF SYIPFFTLFA QLYTTSLSIL  60
HFQMAQNVMG DAAVTVAVPA AENMNGGVSD EIHYRGVRKR PWGRYAAEIR DPFKKTRVWL  120
GTFDTPEEAA RTYDAAAREF HGTKAKTNFL PPTVIKDSSP APLNLNLGGG SSVGSAGSFT  180
YLKQNNLNLG GGSSVGSAAS FTYLKQNHQF RHFPAARGSA PPSARDYQYL EALTGAEVSH  240
HDPSSQRGTV AFLGGGDSVS GCGIRTESES SSVLNYNFND VNQPTITANC LNLDLNLPPP  300
DNM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-1793149562ATERF1
2gcc_A1e-1793149562ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690830.0AB669083.1 Nicotiana tabacum NtERF#206 gene for ethylene response factor #206, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803314.10.0PREDICTED: ethylene-responsive transcription factor 12-like
RefseqXP_016454360.10.0PREDICTED: ethylene-responsive transcription factor 12-like
TrEMBLR4WAR71e-148R4WAR7_TOBAC; Ethylene response factor #206
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1519557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-32ethylene responsive element binding factor 4